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PBIO 691: Seminar - PLANT CELL WALLS The
purpose of this course is to introduce students to the structure and
function
of plant cell walls as well as the scientific approaches, methods and
techniques used to study plant cell walls. Current experimentation and
progress
in the plant cell wall field, including practical applications (e.g.,
plant-based biofuel) will be discussed and featured in student
presentations.
More specifically, each student will be assigned a cell wall molecule
(e.g.,
cellulose) and is expected to: 1) present a review of that cell wall
molecule,
including the approaches, methods and techniques used to study that
molecule
and 2) present a recent primary research paper on that cell wall
molecule,
which is selected in consultation with the instructor. Both of these
presentations
will be given in front of the entire class within the 2 hour time
period. All
class members are expected to read all the selected primary research
papers
prior to the presentations. Students are also expected to provide the
instructor with their presentation material (i.e., PowerPoint’s and/or
other
documents) at least 24 hours in advance of their presentation date so
that this
information can be posted on the course web page. Syllabus
Lectures, Additional Readings and Useful Web Sites Sept. 10-Plant cell wall overview-Allan Showalter http://www.ncbi.nlm.nih.gov/ The National Center for Biotechnology Information http://www.cazy.org/
Carbohydrate-Active
enZYmes Database http://www.arabidopsis.org/ The Arabidopsis Information Resource (TAIR) http://www.ccrc.uga.edu/~mao/cellwall/main.htm
Complex Carbohydrate Research Center http://bioweb.ucr.edu/Cellwall/ Cell Wall Navigator at UC Riverside http://signal.salk.edu/ Salk Institute Genomic Analysis Laboratory http://cellwall.genomics.purdue.edu/ Cell wall genomics at Purdue University http://www.brachytag.org/ BrachyTAG project at the John Innes Centre http://phylomics.ucdavis.edu/cellwalls/gt/index.shtml
RiceGT Database at UC Davis Primary research papers & PowerPoints for Student Presentations (student paper and powerpoint files coming soon!) Sept. 17-Cellulose-Debarti Basu-paper & powerpoint Sept. 24-Hemicellulose (Xyloglucan)-Yuning Chen-paper & powerpoint Oct. 1-Proline-rich proteins-Nan Jiang-paper & powerpoint Oct. 8-Extensins-Richard Wiemels-paper & powerpoint Oct. 15-Pectin-Wen Dong-paper & powerpoint Oct. 22-Hemicellulose (Xylans)-Xiao Liu-paper & powerpoint Oct. 29-Lignin-Dening Ye-paper & powerpoint Nov. 5-Arabinogalactan-proteins-Laura Cristea-paper & powerpoint Nov. 12-Cutin and Suberin-Yan Liang-paper & powerpoint |